Sudden messed up controls?

I was preparing an non-steam windows game to be played through steam so I can custom bind the controller in a way that it would work with the game (it doesn't support controller input natively, only keyboard). but before i even got to do that, when i closed out of the game in mouse mode and i switched back, i couldn't navigate through the steam big picture mode anymore unless it was done with the left joystick (only the joysticks and special buttons receive input anymore)

hardware: asus rog ally
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